Archive | Pipeline

Pipeline version 4.1 is now available for download. New features include visualization tool, remote and local execution, find and replace in data modules, and so on. Click here for new feature highlights. There are also bug fixes, for a detailed list of the changes, please see the release notes.

Continue reading

Pipeline users can go to forums to ask and answer Pipeline related questions. You need to register an account before you can post on the forums.

Continue reading

There is a page that lists new feature highlights for Pipeline version 4.1. See more.

Continue reading

The FSL modules in the pipeline library reference wrapper scripts for executables rather than making simple calls to the binaries. This is due mainly to the environmental variables that must be set for proper usage inside LONI’s cluster. The wrapper scripts were created using Microsoft’s Wordpad, which introduced a series of characters unrecognizable by our Linux nodes cause execution failures. This has been resolved by recreating such wrappers entirely on the server side. Please contact pipeline@loni.ucla.edu if additional issues have arisen. [...]

Continue reading

Pipeline version 4.1 Alpha release is now available for internal LONI users. Please contact the Pipeline team if you are interested in testing the new version. See release notes for a list of new features and bug fixes. Public Beta release will be availble in the near future.

Continue reading

Pipeline version 4.0.5 is now available for download.

Continue reading

The problems that had plagued our cluster throughout the weekend and today have finally been resolved. The Pipeline server is running on our Linux cluster minus 30 compute nodes, which we will bring online as quickly as we can throughout the week.

Continue reading

As some of you may know, we were finally able to get FSL 4.0.3 out to our cluster recently. Currently, we’re working on getting the new version of feat to function in the Pipeline as well, and as soon as the issues are resolved, a new version of FSF2Pipe will be released on our download page that will let you run feat through the Pipeline. Just this morning, we also found out that our Freesurfer 4 license file is corrupt, so [...]

Continue reading

We’re releasing a new build today with some bug fixes, and the changes can be found in the release notes. Also, we’ve had reports of difficulty accessing the server library, or receiving server library updates when they use the Pipeline on Windows. If you’re experiencing this issue, try going to Tools->Options, click on the Cache tab, and clear your library cache. If this still doesn’t help, check the forums for some more tips on this that I’ll be posting there [...]

Continue reading