Pipeline 4.1 supports local and remote execution in the same workflow. For example, you can have modules that run on LONI Pipeline server and also modules run on your local machine. You can connect them, the LONI Pipeline will run the workflow as if they were on the same machine. As always, you can shut down LONI Pipeline while your workflow is running. When you reconnect later, Pipeline will automatically resume your workflow by running the remaining local executions.