Module Detail Information

Name:Bam To Bfq
Type: Module
Short URL:
http://bit.ly/1C54SK3
Description:Create BFQ files for use by the Maq aligner.
Executable:
/scripts/BamToBfq.sh
Input Parameters:
 - Jar File
 - Temp Location
 - Verbosity
 - Quiet
 - Validation Stringency
 - Compression Level
 - Max Records in RAM
 - Create Index
 - Create MD5 File
 - Input
 - Flowcell Barcode
 - Lane Number
 - Reads to Align
 - Read Chunk Size
 - Paired Run
 - Read Name Prefix
 - Include Non PF Reads
 - Don't Clip Adapters
 - Bases to Write
Output Parameters:
 - Analysis Directory
File size:15.81 KB
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