Module Detail Information

Name:MRI CA Label
Type: Module
Short URL:
http://bit.ly/1BuiGdA
Description:Labels subcortical structures, based in GCA model. Creates the files mri/aseg.auto.mgz and mri/aseg.mgz.
Executable:
/mri_ca_label
Input Parameters:
 - Set TR
 - Longitudinal Processing
 - Set TE
 - Cross Sequence
 - Write Likely MR volume
 - Interpolate Volume to be Isotropic 1mm^3
 - Histogram Equalization
 - WM Segmentation
 - Input Volume(s)
 - Mask Final Labeling
 - Set Input Volume
 - Renormalize
 - Expand
 - Write Snapshots Number
 - Label Thin Temporal Lobe
 - Debug Node
 - Fixed White Matter
 - FLASH Predict Intensity
 - No Hippocampus
 - Debug Voxel
 - Use Example
 - Normalize PD
 - No Variance
 - Atlas (gca) File
 - Filter Labeled Volume
 - Histogram Normalize Input Image
 - Debug Label
 - FLASH & Tissue Param Predict
 - Renormalize Class Means
 - Apply Max Likelihood for n Iterations
 - Regularize Variance
 - Set Max Iterations
 - Mean Filter
 - Set Alpha
 - Threshold for Adaptive Renormalization
 - Transform File
 - Disable Gibbs Priors
 - Write Snapshots Filename
 - Align
 - No Big Ventricles
Output Parameters:
 - Output Volume
File size:47.12 KB
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