Module Detail Information

Name:FNIRT (nii.gz)
Type: Module
Short URL:
http://bit.ly/1B7EdW1
Description:FMRIB's Nonlinear Image Registration Tool - nonlinear registration.
Executable:
/fnirt
Input Parameters:
 - Reference Image
 - Input Image
 - Affine Transform
 - Initial Non-Linear Warps
 - Initial Intensity Mapping
 - Config File
 - Reference Mask
 - Input Mask
 - Apply Reference Mask
 - Apply Input Mask
 - Implicit Masking
 - Input Image Masking
 - Reference Mask Value
 - Input Mask Value
 - Max Iterations
 - Sub-Sampling scheme
 - Warp Basis Resolution
 - Spline Order
 - FWHM Input Volume
 - FWHM Ref Volume
 - Warp-Field Regularisation Model
 - Weight of Regularisation
 - Lambda ssq
 - Jacobian Range
 - Calculate Derivatives Using Ref
 - Intensity-Mapping Model
 - Intensity Order
 - Local Intensities Resolution
 - Regularisation Weight (bias-field)
 - Estimate Intensity-Mapping
 - Precision
 - Print Diagnostic Info
 - Help
Output Parameters:
 - Output Field Coefficients
 - Output Image
 - Output File with Field
 - Output Jacobian
 - Output Intensity Modulated
 - Output Intensity Mapping
 - Output Log File
File size:34.61 KB
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