Module Detail Information

Name:FSLStats (nii.gz)
Type: Module
Short URL:
http://bit.ly/18aYTpf
Description:Report certain summary statistics for an input 3D/4D image. Of particular value is the "robust intensity range" which calculates the 2% and 98% percentiles.
Executable:
/fslstats
Input Parameters:
 - Input
 - Lower Threshold
 - Upper Threshold
 - Output (robust intensities)
 - Output (intensities)
 - Output (mean entropy)
 - Output (volume for zero voxels)
 - Output (volume for nonzero voxels)
 - Output (mean for zero voxels)
 - Output (mean for nonzero voxels)
 - Ouptut (standard deviation for zero voxels)
 - Ouptut (standard deviation for nonzero voxels)
 - Output (smallest ROI)
 - Output (max voxel coordinates)
 - Output (mean entropy of nonzero voxels)
 - Output (min voxel coordinates)
 - Output (COG in mm)
 - Output (COG in voxel)
 - Output (nth percentile between 0 and 100)
 - Output (nth percentile for nonzero)
 - Abs Value
 - Treat as Zero
 - Masking
 - Output (histogram)
 - Output (histogram with limits)
Output Parameters:
 - Output
File size:23.68 KB
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