Workflow Detail Information

Name:Integrated Bioinformatics (MAQ, SAMTools, Bowtie)
Type: Workflow
Short URL:
http://bit.ly/1BuiKdp
Description:This workflow contains the first step of a genomics data analysis protocol designed and implemented by Federica Torri, Fabio Macciardi and Ivo Dinov to process large number of sequence data outputted by the Illumina sequencing pipeline. See Step II analysis (GATK/QC/Cleaning) here. This protocol is implemented using the LONI Pipeline environment and includes the following types of computational resources: * Mapping and Assembly with Qualities (MAQ) * Sequence Alignment and Mapping tools (SAMtools) * Bowtie * etc.

 View workflow in a new window
File size:496.8 KB
View Source    Download    Open    Run